Center for the Study of Systems Biology

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Welcome to the Center for the Study of Systems Biology at Georgia Tech

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What is Systems Biology?

Recognized by most experts in the field as the future of biology, Systems Biology seeks to understand how complex living systems interact with each other so that we can diagnose and treat disorders such as cancer. While past biological research has taught us much about how these individual biological units are structured and function, future biology will be focused on understanding how these units interact.

Vision of the Center for the Study of Systems Biology

With the completion of the sequencing of the human genome, the possibility exists to unlock the secrets of life and with such understanding, powerful new approaches to the treatment of disease will emerge. Read More →

Research Highlights

Origin of Life’s Handedness and Protein Biochemistry

Examine your hands. The right is a mirror image of the left. They look very similar, but you know they’re not when you try to put your left hand inside a right glove.

The molecules of life have a similar handedness. Proteins for example are like your left hand, made up of amino acids that are all left-handed. This phenomenon is called chirality. How chiral systems emerged is one of the key questions of origins-of-life research.

On the possible origin of protein homochirality, structure, and biochemical function

Living systems contain mainly chiral macromolecules, including proteins. How L-chiral proteins emerged from demi-chiral mixtures is unknown. Our simulations show that, compared to contemporary proteins, demi-chiral proteins have shorter regular secondary structures due to fewer internal hydrogen bonds, but similar global folds and small molecule binding sites. Demi-chiral proteins contain L-chiral substructures matching native active site geometries. Among the most frequently generated enzymes with native active site residues are ancient functions associated with metabolism and replication. This suggests that demi-chiral proteins could engage in early metabolism, creating the feedback loop for transcription and cell formation partly responsible for life’s emergence.

Jeffrey Skolnick, Mu Gao, and Hongyi Zhou win the NCATS ASPIRE Design Challenge 3: Predictive Algorithms for Translational Innovation in Pain, Opioid Use Disorder and Overdose

 

Time-resolved x-ray crystallography capture of a slow reaction tetrahydrofolate intermediate

Structural Dynamics – Editor’s Pick

 

Jeffrey Skolnick: 2018 Sigma Xi Sustained Research Award – Applying computational systems biology to improve human health

Georgia Tech has named Jeffrey Skolnick the recipient of the 2018 Sigma Xi Sustained Research Award. The award recognizes Skolnick’s exceptional sustained imagination and productivity in the fields of systems biology, computational biology, bioinformatics, cancer metabolomics, protein structure prediction and evolution, drug design, and simulations of cellular processes.

Rational Design of Novel Allosteric Dihydrofolate Reductase Inhibitors Showing Antibacterial Effects on Drug-Resistant Escherichia coli Escape Variants

Highly Cited – Top Altmetric 2017 Articles

Read More →

  • Skolnick Research Group
    • Jeffrey Skolnick
    • Courtney Astore
    • Hongnan “Conan” Cao
    • Mu Gao
    • Jessica Gilmore Forness
    • Bartosz Ilkowski
    • Vishva Natarajan
    • Heather Patrick
    • Hongyi Zhou
    • Former Group Members
  • Software and Services
    • Services
      • DESTINI
      • DR. PRODIS
      • ENTPRISE
      • ENTPRISE-X
      • FINDSITEcomb
      • FINDSITEcomb2.0
    • Downloads
      • APoc
      • Cavitator
      • DBD-Hunter
      • DBD-Threader
      • EFICAz2.5
      • Fr-TM-align
      • GOAP
      • iAlign
      • IS-score
      • LIGSIFT
      • PULCHRA
    • Databases
      • Apo and Holo Pairs
      • New Human GPCR Modeling and Virtual Screening
      • PDB-like Structures
    • Simulations
      • E. coli Intracellular Dynamics

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Center for the Study of Systems Biology
950 Atlantic Drive | Atlanta, GA 30332
(404) 407-8976 
jessica.forness@biosci.gatech.edu

Skolnick Research Group
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